Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Gm12085-201ENSMUST00000119263 940 ntBASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv17A0A140T8P8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Mir8112-201ENSMUST00000184382 131 ntBASIC13□□□□□ -0.33
Trbv17A0A140T8P8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv17A0A140T8P8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13□□□□□ -0.33
Trbv17A0A140T8P8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv17A0A140T8P8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms