Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm2399-201ENSMUST00000104944 225 ntBASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv1-88A0A140T8N1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm7291-201ENSMUST00000199147 382 ntBASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Igkv1-88A0A140T8N1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm10418-201ENSMUST00000100943 576 ntBASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms