Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm10566-201ENSMUST00000086739 996 ntBASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm16061-201ENSMUST00000122167 857 ntBASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Actl10-202ENSMUST00000226583 1501 ntBASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Gm6433-201ENSMUST00000118634 875 ntBASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atg4a-psA0A0G2JFS9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms