Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-27A0A0G2JF28 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm5522-201ENSMUST00000189483 1242 ntBASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Igkv8-27A0A0G2JF28 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms