Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm24841-201ENSMUST00000158676 357 ntBASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mir1199-201ENSMUST00000117015 119 ntBASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm12085-201ENSMUST00000119263 940 ntBASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.34□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms