Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.27□□□□□ -0.28
Trbv13-3A0A0B4J1H2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv13-3A0A0B4J1H2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv13-3A0A0B4J1H2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv13-3A0A0B4J1H2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv13-3A0A0B4J1H2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm26833-201ENSMUST00000180899 440 ntBASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm21956-201ENSMUST00000179946 522 ntBASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv13-3A0A0B4J1H2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms