Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.72□□□□□ -0.21
Trav6d-5A0A075B6B9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-5A0A075B6B9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-5A0A075B6B9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms