Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-3A0A075B6A4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12d-3A0A075B6A4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12d-3A0A075B6A4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12d-3A0A075B6A4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Smad6-203ENSMUST00000179458 273 ntBASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Asic1-205ENSMUST00000228185 1818 ntBASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms