Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.15□□□□□ -0.3
Trav16A0A075B653 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav16A0A075B653 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav16A0A075B653 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav16A0A075B653 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.14□□□□□ -0.31
Trav16A0A075B653 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16A0A075B653 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Gm38285-201ENSMUST00000192928 922 ntBASIC13.13□□□□□ -0.31
Trav16A0A075B653 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.13□□□□□ -0.31
Trav16A0A075B653 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.13□□□□□ -0.31
Trav16A0A075B653 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav16A0A075B653 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms