Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Trmt13-210ENSMUST00000198454 880 ntBASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav5-4A0A075B652 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Gm37856-201ENSMUST00000191634 999 ntBASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav5-4A0A075B652 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Gm12382-201ENSMUST00000122005 922 ntBASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-4A0A075B652 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Gm12527-201ENSMUST00000117967 564 ntBASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms