Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-4-dv10A0A075B651 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-4-dv10A0A075B651 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gm42569-201ENSMUST00000200539 472 ntBASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-4-dv10A0A075B651 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-4-dv10A0A075B651 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.21□□□□□ -0.3
Trav4-4-dv10A0A075B651 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-4-dv10A0A075B651 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-4-dv10A0A075B651 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms