Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Gm42569-201ENSMUST00000200539 472 ntBASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Gm6211-202ENSMUST00000167849 925 ntBASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-6A0A075B603 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Gm10849-201ENSMUST00000100397 618 ntBASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Gm2399-201ENSMUST00000104944 225 ntBASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Gm7291-201ENSMUST00000199147 382 ntBASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-6A0A075B603 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-6A0A075B603 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.65□□□□□ -0.39
Trav6-6A0A075B603 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-6A0A075B603 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-6A0A075B603 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms