Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL354868.1-201ENST00000417077 482 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 THEM7P-201ENST00000419556 672 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC097523.2-201ENST00000435551 652 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 LINC00328-2P-201ENST00000436585 219 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL138787.1-202ENST00000437804 898 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 Z84478.1-201ENST00000438230 1219 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 CCNJP1-201ENST00000450600 1149 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX3Q99909 HMGN1P8-201ENST00000463578 288 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RN7SL741P-201ENST00000482473 289 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 MTND3P6-201ENST00000485242 339 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RN7SL561P-201ENST00000488553 281 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL117692.1-201ENST00000494283 713 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC018442.3-201ENST00000523025 183 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC124891.1-201ENST00000536322 519 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL162632.2-201ENST00000553933 399 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX3Q99909 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC018552.1-201ENST00000562099 811 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 MT1CP-201ENST00000567054 174 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 RN7SL208P-201ENST00000577964 296 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 AL953862.2-201ENST00000603089 820 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 GMCL1P2-201ENST00000605230 823 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AC005828.7-201ENST00000607331 556 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 RNA5SP439-201ENST00000617595 124 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AL391597.1-201ENST00000618707 694 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SSX3Q99909 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 AL603750.1-201ENST00000624216 1717 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 AC110373.1-201ENST00000505994 3505 ntBASIC5.31□□□□□ -1.56
SSX3Q99909 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX3Q99909 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX3Q99909 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX3Q99909 PARP4P2-201ENST00000446672 3326 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 AC109446.4-201ENST00000623235 2755 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSX3Q99909 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSX3Q99909 RNU6-729P-201ENST00000384399 107 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC245036.1-201ENST00000391727 309 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX3Q99909 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 AC113412.1-201ENST00000425840 504 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX3Q99909 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX3Q99909 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX3Q99909 Z83838.1-202ENST00000456225 839 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX3Q99909 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX3Q99909 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX3Q99909 RPL19P11-201ENST00000495944 589 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX3Q99909 RN7SKP183-201ENST00000517169 324 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX3Q99909 AC008429.2-201ENST00000523057 864 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX3Q99909 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX3Q99909 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX3Q99909 AC026956.1-201ENST00000558741 396 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SSX3Q99909 AC106785.4-201ENST00000569492 412 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC019322.1-201ENST00000571869 389 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX3Q99909 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX3Q99909 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SSX3Q99909 AC073575.2-201ENST00000614212 627 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC012676.3-201ENST00000614983 479 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AC005277.2-201ENST00000617898 390 ntBASIC5.3□□□□□ -1.56
SSX3Q99909 AL354718.1-201ENST00000619764 589 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms