Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 ABCC13-202ENST00000463099 3842 ntBASIC5.75□□□□□ -1.49
SNX3O60493 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SNX3O60493 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 RNA5SP427-201ENST00000365323 119 ntBASIC5.75□□□□□ -1.49
SNX3O60493 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 FECHP1-201ENST00000431896 1214 ntBASIC5.75□□□□□ -1.49
SNX3O60493 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AL139135.2-201ENST00000445040 433 ntBASIC5.75□□□□□ -1.49
SNX3O60493 AC097359.1-201ENST00000447946 463 ntBASIC5.75□□□□□ -1.49
SNX3O60493 AC016027.4-201ENST00000450866 277 ntBASIC5.75□□□□□ -1.49
SNX3O60493 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AC147055.1-201ENST00000509261 750 ntBASIC5.75□□□□□ -1.49
SNX3O60493 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX3O60493 LSM3P2-201ENST00000551246 273 ntBASIC5.75□□□□□ -1.49
SNX3O60493 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX3O60493 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AC009852.2-201ENST00000567898 485 ntBASIC5.75□□□□□ -1.49
SNX3O60493 RN7SL311P-201ENST00000579858 306 ntBASIC5.75□□□□□ -1.49
SNX3O60493 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 AL035417.2-201ENST00000603887 796 ntBASIC5.75□□□□□ -1.49
SNX3O60493 AC138473.1-201ENST00000605717 526 ntBASIC5.75□□□□□ -1.49
SNX3O60493 FAM72A-208ENST00000607379 1139 ntBASIC5.75□□□□□ -1.49
SNX3O60493 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX3O60493 AL035661.1-201ENST00000620459 1144 ntBASIC5.75□□□□□ -1.49
SNX3O60493 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX3O60493 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 AC011755.1-201ENST00000623763 2049 ntBASIC5.75□□□□□ -1.49
SNX3O60493 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX3O60493 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SNX3O60493 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
SNX3O60493 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 AC104964.3-201ENST00000606115 2860 ntBASIC5.74□□□□□ -1.49
SNX3O60493 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 RN7SKP1-201ENST00000365525 307 ntBASIC5.74□□□□□ -1.49
SNX3O60493 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX3O60493 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX3O60493 ATP5LP4-201ENST00000434169 307 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX3O60493 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 RNA5SP206-201ENST00000516703 121 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC130364.2-201ENST00000528639 604 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC137627.1-201ENST00000545761 289 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 AC009303.3-201ENST00000591103 736 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC010487.1-201ENST00000594408 1172 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 AL139124.1-201ENST00000609123 421 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AL589743.6-201ENST00000611025 117 ntBASIC5.74□□□□□ -1.49
SNX3O60493 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX3O60493 MIR6807-201ENST00000621968 92 ntBASIC5.74□□□□□ -1.49
SNX3O60493 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms