Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 SNORD94-201ENST00000386037 137 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 U3.28-201ENST00000391249 210 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AL033519.1-201ENST00000407266 307 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 GPS2P1-201ENST00000411761 986 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AL360013.1-201ENST00000419031 858 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC006509.1-201ENST00000420788 634 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC009784.1-201ENST00000426484 460 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC015983.1-201ENST00000441577 373 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 RN7SL655P-201ENST00000486087 298 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC105384.2-201ENST00000508433 640 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.7□□□□□ -1.66
SSSCA1O60232 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.7□□□□□ -1.66
SSSCA1O60232 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.7□□□□□ -1.66
SSSCA1O60232 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.7□□□□□ -1.66
SSSCA1O60232 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 DPPA3P2-202ENST00000557188 1219 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AL031429.2-201ENST00000602605 649 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 RFPL4AP6-201ENST00000616792 846 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 AC018558.4-201ENST00000622153 281 ntBASIC4.7□□□□□ -1.66
SSSCA1O60232 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SSSCA1O60232 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSSCA1O60232 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 MFSD8-219ENST00000641228 2559 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AC002525.1-201ENST00000624392 1622 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.69□□□□□ -1.66
SSSCA1O60232 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AC121334.1-201ENST00000396414 802 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 RPSAP65-201ENST00000429660 595 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 RPS12P17-201ENST00000438591 377 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AC026782.2-201ENST00000510845 636 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AL589765.6-201ENST00000601909 549 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 FXYD6P1-201ENST00000604857 285 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 NANOGP3-201ENST00000605855 286 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.69□□□□□ -1.66
SSSCA1O60232 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 MIR6849-201ENST00000618543 69 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 MIR6807-201ENST00000621968 92 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AC021766.1-201ENST00000624404 741 ntBASIC4.69□□□□□ -1.66
SSSCA1O60232 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SSSCA1O60232 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.69□□□□□ -1.66
SSSCA1O60232 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSSCA1O60232 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.69□□□□□ -1.66
SSSCA1O60232 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.68□□□□□ -1.66
SSSCA1O60232 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC092681.1-201ENST00000297369 291 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.68□□□□□ -1.66
SSSCA1O60232 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSSCA1O60232 AL139135.1-201ENST00000412675 209 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 RPS4XP5-201ENST00000419038 768 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms