Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC005519.1-201ENST00000554490 601 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.72□□□□□ -1.49
CLPTM1O96005 ARGFXP2-201ENST00000579304 949 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 RPL7AP69-201ENST00000595306 806 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AC091133.5-201ENST00000603088 301 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 SNORD96A-201ENST00000606577 79 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AL008582.1-201ENST00000609612 442 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 MIR6503-201ENST00000622884 86 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AL035425.4-201ENST00000624509 1063 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLPTM1O96005 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC010266.2-201ENST00000564741 3255 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 PSMC1P4-201ENST00000515236 1327 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CLPTM1O96005 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLPTM1O96005 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.49
CLPTM1O96005 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.71□□□□□ -1.49
CLPTM1O96005 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
CLPTM1O96005 SAGE3P-201ENST00000619800 1635 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.71□□□□□ -1.5
CLPTM1O96005 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC010894.1-201ENST00000313760 361 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AL033519.1-201ENST00000407266 307 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.71□□□□□ -1.5
CLPTM1O96005 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 NFYAP1-201ENST00000431953 972 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 RSL24D1P2-201ENST00000445584 366 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AC023271.1-201ENST00000445936 1090 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AC073476.1-201ENST00000452854 407 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AP003385.3-201ENST00000472498 287 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AC135999.1-201ENST00000478962 479 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 RPS7P11-201ENST00000484240 586 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.71□□□□□ -1.5
CLPTM1O96005 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.71□□□□□ -1.5
CLPTM1O96005 MIR4732-201ENST00000581873 76 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.71□□□□□ -1.5
CLPTM1O96005 HTR1DP1-201ENST00000616500 888 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AL357153.4-201ENST00000620487 1016 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 RAB28P4-201ENST00000622233 665 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 AC016583.1-201ENST00000624221 2431 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLPTM1O96005 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 PSMC1P6-201ENST00000477233 1319 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
CLPTM1O96005 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLPTM1O96005 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLPTM1O96005 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.71□□□□□ -1.5
CLPTM1O96005 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
CLPTM1O96005 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLPTM1O96005 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CLPTM1O96005 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLPTM1O96005 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLPTM1O96005 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 MIR551B-201ENST00000384984 96 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 SNORD94-201ENST00000386037 137 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AL136231.1-201ENST00000429407 730 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 RPL12P49-201ENST00000441100 121 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms