Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL133482.1-201ENST00000415988 498 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 VN1R21P-201ENST00000426703 765 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC094019.1-201ENST00000434678 472 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AL359265.1-201ENST00000440296 795 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.72□□□□□ -1.65
SSSCA1O60232 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 DEFB109A-201ENST00000482450 265 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC021146.10-201ENST00000515628 706 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 RNA5SP434-201ENST00000516647 121 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 AP001994.1-201ENST00000527539 826 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AP004609.2-201ENST00000532177 190 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.72□□□□□ -1.65
SSSCA1O60232 GARSP1-201ENST00000570895 719 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AL645933.2-201ENST00000606743 1207 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 MIR8082-201ENST00000612488 81 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 AL161912.4-201ENST00000623889 2468 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.71□□□□□ -1.65
SSSCA1O60232 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSSCA1O60232 RN7SKP81-201ENST00000365603 331 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AC092634.1-201ENST00000366505 199 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 RNU1-136P-201ENST00000384181 164 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 YWHAZP4-201ENST00000392459 708 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 RPL35AP31-201ENST00000418340 337 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 ELOBP4-201ENST00000423418 296 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AP003385.1-201ENST00000426387 893 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 RPL5P25-201ENST00000441148 775 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AL645936.1-201ENST00000441979 518 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 RPS7P3-201ENST00000443360 580 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC009244.1-201ENST00000450566 258 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 RN7SL552P-201ENST00000462094 276 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC008629.2-201ENST00000503783 483 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.71□□□□□ -1.66
SSSCA1O60232 TXNP4-201ENST00000575018 310 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AC100832.2-201ENST00000582080 776 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.71□□□□□ -1.66
SSSCA1O60232 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC002069.2-201ENST00000603580 883 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC117503.3-201ENST00000623811 601 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AC068213.1-201ENST00000625124 226 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
SSSCA1O60232 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
SSSCA1O60232 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 GTF2IP4-201ENST00000453092 2054 ntBASIC4.71□□□□□ -1.66
SSSCA1O60232 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
SSSCA1O60232 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.71□□□□□ -1.66
SSSCA1O60232 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSSCA1O60232 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSSCA1O60232 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms