Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RPL5P14-201ENST00000494197 878 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC021220.1-201ENST00000507445 630 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 OR5H7P-201ENST00000514084 930 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 RN7SKP238-201ENST00000516483 249 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 RNA5SP340-201ENST00000517132 107 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC036111.2-201ENST00000533247 901 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AP003115.1-201ENST00000569849 463 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 RN7SL208P-201ENST00000577964 296 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AL049840.5-201ENST00000602827 552 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC111186.1-201ENST00000604684 130 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AL080312.2-201ENST00000613001 630 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC004801.6-201ENST00000616571 978 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC127024.6-201ENST00000621598 424 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AP003499.2-201ENST00000624100 483 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC079949.2-201ENST00000617117 2933 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC104837.1-201ENST00000444644 1587 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 DDX43P1-201ENST00000510713 1763 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 OR13C3-201ENST00000374781 1108 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 SNORA70.9-201ENST00000384370 135 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 RPL5P20-201ENST00000403848 896 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 SCARNA5-201ENST00000516201 276 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC060775.1-201ENST00000518241 520 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC007346.1-201ENST00000569208 867 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 TMF1P1-201ENST00000576058 373 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AL133247.2-201ENST00000603236 482 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC013244.1-201ENST00000604279 193 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC092681.3-201ENST00000609463 678 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AL352984.2-202ENST00000613699 155 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 U1.34-201ENST00000618578 162 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC080188.3-201ENST00000624842 748 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 DDX6P1-205ENST00000441966 1436 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
USP35Q9P2H5 RPL31P11-201ENST00000426558 1558 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC007159.1-201ENST00000566529 4706 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 AC245100.2-201ENST00000454544 1679 ntBASIC8.69□□□□□ -1.02
USP35Q9P2H5 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USP35Q9P2H5 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 RNU6-1251P-201ENST00000364502 107 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 SUGT1P2-201ENST00000379452 992 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC074367.1-201ENST00000438685 1125 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms