Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.74□□□□□ -1.49
CLPTM1O96005 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 AL161756.3-201ENST00000641216 2071 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLPTM1O96005 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RNA5SP321-201ENST00000362722 111 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 RNA5SP140-201ENST00000364524 92 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RPEP4-201ENST00000437636 602 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AL663074.2-201ENST00000440621 479 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 VPS25P1-201ENST00000455691 508 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AKR1D1P1-201ENST00000457236 936 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RN7SL83P-201ENST00000468131 297 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 GLUD1P3-202ENST00000508551 200 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AL390198.2-201ENST00000510553 222 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AP004609.2-201ENST00000532177 190 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 OR9G2P-201ENST00000533326 880 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 ZNF322P1-201ENST00000568013 1209 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 MIR3908-201ENST00000579798 126 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.73□□□□□ -1.49
CLPTM1O96005 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.73□□□□□ -1.49
CLPTM1O96005 NPIPB1P-202ENST00000588786 828 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.73□□□□□ -1.49
CLPTM1O96005 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC211486.4-201ENST00000621495 113 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 MIR6813-201ENST00000621638 56 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 AC138965.3-201ENST00000623875 498 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.73□□□□□ -1.49
CLPTM1O96005 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 AL158152.1-201ENST00000602652 1435 ntBASIC5.73□□□□□ -1.49
CLPTM1O96005 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLPTM1O96005 AC005005.4-201ENST00000623789 16698 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 RN7SKP77-201ENST00000363261 353 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AC019178.1-201ENST00000392337 440 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC079809.1-201ENST00000415468 276 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AL359092.1-201ENST00000417156 265 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 VN1R53P-201ENST00000429536 957 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AL136455.1-201ENST00000441083 1240 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 RARRES2P3-201ENST00000457739 473 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 RN7SL197P-201ENST00000466981 299 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.72□□□□□ -1.49
CLPTM1O96005 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLPTM1O96005 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.72□□□□□ -1.49
CLPTM1O96005 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 OR52H2P-201ENST00000514607 902 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 RNU6-362P-201ENST00000516736 90 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.72□□□□□ -1.49
CLPTM1O96005 AC084851.2-201ENST00000530377 364 ntBASIC5.72□□□□□ -1.49
CLPTM1O96005 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.72□□□□□ -1.49
CLPTM1O96005 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms