Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RANP6-201ENST00000413691 644 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 CYP4F30P-202ENST00000420048 405 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AL390879.2-203ENST00000426943 1121 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 UBBP5-201ENST00000446970 266 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AP002345.1-201ENST00000456493 928 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC090602.1-201ENST00000469695 252 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC131392.1-201ENST00000506490 633 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC026782.2-201ENST00000510845 636 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 HMGB1P47-201ENST00000511281 589 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 IGKV1D-22-201ENST00000518953 324 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 OR4A40P-201ENST00000533878 948 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC026956.1-201ENST00000558741 396 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 OR4C49P-201ENST00000563891 900 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 OR4H6P-202ENST00000603819 340 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC007423.1-201ENST00000605009 627 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC073575.2-201ENST00000614212 627 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC025262.3-201ENST00000623666 360 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 FANCD2P2-201ENST00000437591 1400 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 DDX6P1-205ENST00000441966 1436 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC38Q502W7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC38Q502W7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC38Q502W7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CCDC38Q502W7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC38Q502W7 AC245100.2-201ENST00000454544 1679 ntBASIC6.55□□□□□ -1.36
CCDC38Q502W7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC107977.1-201ENST00000355745 939 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 RNU6-1251P-201ENST00000364502 107 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 GLUD1P9-201ENST00000420997 1173 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC092106.2-201ENST00000436597 487 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 OR13K1P-201ENST00000444577 975 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AL022237.1-201ENST00000446663 358 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 CCNJP1-201ENST00000450600 1149 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC103563.5-201ENST00000455643 364 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AKR1D1P1-201ENST00000457236 936 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 MTND6P32-201ENST00000457611 483 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 EIF2S2P4-201ENST00000461070 984 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 OR4H6P-201ENST00000563771 921 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC068408.1-201ENST00000577406 1144 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AL133247.2-201ENST00000603236 482 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AL133370.2-201ENST00000619934 439 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC015722.2-201ENST00000622210 551 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 AP003499.2-201ENST00000624100 483 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 AC135068.11-201ENST00000636378 921 ntBASIC6.54□□□□□ -1.36
CCDC38Q502W7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC38Q502W7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC38Q502W7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC38Q502W7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms