Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ATP5A1P8-201ENST00000423669 1291 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 DNAJA1P1-201ENST00000425106 1187 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 VN1R20P-201ENST00000425215 966 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 OR5BE1P-201ENST00000425977 939 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 GAPDHP59-201ENST00000435908 267 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 VN1R25P-201ENST00000443385 738 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 NPM1P13-201ENST00000452663 865 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC108734.3-201ENST00000481241 1165 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 RN7SL362P-201ENST00000494228 267 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC093870.1-201ENST00000506837 213 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 OR5BM1P-201ENST00000512021 366 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 OR10V3P-201ENST00000525712 725 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 DUXAP6-201ENST00000553858 601 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC027455.1-201ENST00000574104 594 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC005244.1-201ENST00000582566 339 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AC067838.1-201ENST00000606064 577 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 AK6-205ENST00000618980 483 ntTSL 2 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 OR5BE1P-202ENST00000641168 1176 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 ZNF90P1-201ENST00000480493 1951 ntBASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CSB-PGBD3P0DP91 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC006141.1-201ENST00000581917 2170 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 U3.52-201ENST00000384034 216 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RNU6-796P-201ENST00000391086 107 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RPL5P8-201ENST00000396820 815 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 UBE2V1P11-201ENST00000411559 285 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 TRGV6-201ENST00000417928 299 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AL360013.1-201ENST00000419031 858 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 SLC4A1APP1-201ENST00000419995 602 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RPL5P6-201ENST00000425640 886 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 NEK4P1-201ENST00000433383 879 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC004022.1-201ENST00000447766 1066 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 OR7A15P-201ENST00000449848 1009 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RN7SL39P-201ENST00000462264 297 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC083806.1-201ENST00000468934 316 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC135999.1-201ENST00000478962 479 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RPL21P47-201ENST00000483696 477 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 HSD3BP3-201ENST00000514706 994 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 LRRC6P1-201ENST00000532188 885 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 OR4A40P-201ENST00000533878 948 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 RFPL1S-203ENST00000539579 330 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC091133.5-201ENST00000603088 301 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC025588.2-201ENST00000604851 466 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC116165.2-201ENST00000616705 206 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AL121890.3-201ENST00000618494 516 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC025262.3-201ENST00000623666 360 ntBASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CSB-PGBD3P0DP91 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms