Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNB1IP1Q9NPC3 AC005224.3-201ENST00000584683 2140 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 SNORD35A-201ENST00000363389 86 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 RNA5SP85-201ENST00000365378 119 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 DPPA2P2-201ENST00000418220 897 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AL360013.1-201ENST00000419031 858 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 OR6R1P-201ENST00000431838 940 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 GTF3AP6-201ENST00000432585 986 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC073072.2-201ENST00000447425 348 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 RBMY2HP-201ENST00000457961 720 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 RN7SL714P-201ENST00000487050 298 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 PDCL3P4-201ENST00000489621 720 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 OR4A43P-201ENST00000532938 908 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC009729.1-201ENST00000548873 1133 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC025283.1-201ENST00000572039 734 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC006115.2-201ENST00000596823 202 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 MIR6885-201ENST00000612241 66 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC005618.4-201ENST00000625053 554 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC007603.3-201ENST00000636915 979 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AL022311.1-201ENST00000623726 19416 ntBASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNB1IP1Q9NPC3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC009962.1-201ENST00000567327 3813 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AL353743.3-201ENST00000442109 1468 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC022325.1-201ENST00000502748 2199 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC024651.2-201ENST00000562480 2098 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 BX119904.3-201ENST00000428194 957 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 MED28P4-201ENST00000433137 572 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC092601.1-201ENST00000444526 383 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AL161722.1-201ENST00000446972 1032 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 RPL23AP60-201ENST00000450011 454 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC073594.1-201ENST00000462065 364 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC124945.1-201ENST00000485133 188 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC018645.1-201ENST00000505003 109 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 RNA5SP418-201ENST00000515951 117 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 TPM3P3-201ENST00000521343 354 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 OR7E158P-201ENST00000524483 910 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 BCAS2P1-201ENST00000528022 632 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 TDGP1-201ENST00000543961 1229 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 TPRX1P1-201ENST00000557620 319 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms