Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 PRELID1P1-201ENST00000403549 660 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 RPS7P8-201ENST00000418311 581 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 GAPDHP19-201ENST00000431768 1005 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 KRT8P51-201ENST00000438938 274 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 RN7SL393P-201ENST00000463588 296 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 CCDC58P1-201ENST00000578567 430 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC010487.1-201ENST00000594408 1172 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC089999.3-201ENST00000622440 577 ntBASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC50Q8IVM0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 TCP11X1-202ENST00000622971 1372 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL158827.1-201ENST00000416300 391 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC094019.1-201ENST00000434678 472 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL022324.2-201ENST00000434827 780 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC010086.1-201ENST00000437359 1052 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 OR3D1P-201ENST00000438288 955 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL645936.1-201ENST00000441979 518 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 RPL23AP60-201ENST00000450011 454 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL162739.1-201ENST00000450606 307 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 RN7SL104P-201ENST00000498686 293 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC113191.1-201ENST00000517759 403 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 TXNP4-201ENST00000575018 310 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC010503.3-201ENST00000594355 540 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 OR7A8P-201ENST00000595427 913 ntBASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC50Q8IVM0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms