Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC091932.1-201ENST00000569381 427 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.98□□□□□ -1.45
SHOX2O60902 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 MIR7854-201ENST00000620068 65 ntBASIC5.98□□□□□ -1.45
SHOX2O60902 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.98□□□□□ -1.45
SHOX2O60902 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHOX2O60902 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.98□□□□□ -1.45
SHOX2O60902 THAP12P5-201ENST00000405864 2275 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.97□□□□□ -1.45
SHOX2O60902 AC092701.1-201ENST00000623627 1551 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHOX2O60902 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHOX2O60902 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHOX2O60902 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 RNA5SP429-201ENST00000363688 109 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 U3.52-201ENST00000384034 216 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 RNA5SP91-201ENST00000390902 119 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 EEF1GP6-201ENST00000402309 905 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 PPIAP23-201ENST00000420099 497 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 RPL12P11-201ENST00000439970 501 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AL603882.1-201ENST00000463059 681 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 ABCC13-202ENST00000463099 3842 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHOX2O60902 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 RPL38P3-201ENST00000484463 213 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AF305872.1-201ENST00000485217 471 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AC092349.1-201ENST00000504903 310 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 RNU6-513P-201ENST00000516104 104 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AP005902.2-201ENST00000518393 307 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHOX2O60902 AC020937.1-201ENST00000519677 1013 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.97□□□□□ -1.45
SHOX2O60902 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 MIR4312-201ENST00000579909 76 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 AC005479.3-201ENST00000602790 431 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 HIRAP1-201ENST00000605318 787 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 AC009283.1-201ENST00000615852 645 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 AC126474.2-201ENST00000623268 1750 ntBASIC5.97□□□□□ -1.45
SHOX2O60902 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.97□□□□□ -1.45
SHOX2O60902 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHOX2O60902 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHOX2O60902 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SHOX2O60902 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SHOX2O60902 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.96□□□□□ -1.45
SHOX2O60902 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHOX2O60902 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 ADAM5-202ENST00000399789 1942 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.96□□□□□ -1.46
SHOX2O60902 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHOX2O60902 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHOX2O60902 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHOX2O60902 YWHAZP5-201ENST00000419975 730 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 OR10T1P-201ENST00000424327 947 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC009362.1-201ENST00000427253 406 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 RPSAP65-201ENST00000429660 595 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AL359265.1-201ENST00000440296 795 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.96□□□□□ -1.46
SHOX2O60902 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 CEACAMP11-201ENST00000455211 583 ntBASIC5.96□□□□□ -1.46
SHOX2O60902 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.96□□□□□ -1.46
SHOX2O60902 AC069304.1-201ENST00000491593 704 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms