Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 GOLGA5P1-201ENST00000507317 980 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RNU6-760P-201ENST00000516078 97 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RNA5SP400-201ENST00000517155 111 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 OR10D4P-201ENST00000525892 951 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SL475P-201ENST00000583379 298 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 FAM60CP-201ENST00000591086 664 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC040174.2-201ENST00000602701 465 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC012368.3-201ENST00000604190 219 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL445649.1-201ENST00000615941 691 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AP000550.3-201ENST00000637734 379 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 OR7E91P-202ENST00000642062 1198 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 GUCY1B2-204ENST00000531898 1979 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 WBP11P1-201ENST00000562560 1931 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 RNU6-152P-201ENST00000384037 107 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 MIR433-201ENST00000384837 93 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SKP161-201ENST00000411110 305 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 CBX1P3-201ENST00000413296 527 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 RPL12P43-201ENST00000420608 499 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 HSFY1P1-201ENST00000423928 1178 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL392003.1-201ENST00000434394 243 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SL165P-201ENST00000477476 291 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC063977.7-201ENST00000594454 337 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC006924.1-201ENST00000610750 559 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AL122023.1-201ENST00000622847 530 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 AC106858.1-201ENST00000637497 429 ntBASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP3Q96JB5 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.28
CDK5RAP3Q96JB5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.09□□□□□ -1.28
CDK5RAP3Q96JB5 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.09□□□□□ -1.28
CDK5RAP3Q96JB5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 SNX18P3-202ENST00000565670 1750 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 SAMMSON-210ENST00000641260 1308 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 RPL11P4-201ENST00000332269 436 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 FUNDC2P3-201ENST00000334716 533 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AL133260.1-201ENST00000405720 405 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 DHFRP2-201ENST00000414224 547 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 Z82198.3-201ENST00000421145 199 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 CXCR2P1-202ENST00000443392 1074 ntBASIC7.08□□□□□ -1.28
CDK5RAP3Q96JB5 OR2L9P-201ENST00000444456 913 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms