Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AP000859.1-201ENST00000525536 307 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 EIF4A2P5-201ENST00000529914 499 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC084851.2-201ENST00000530377 364 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC009120.3-201ENST00000563335 499 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC090651.1-201ENST00000567865 634 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC027281.1-201ENST00000574178 758 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AL135786.2-201ENST00000608422 615 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC093388.1-201ENST00000609166 430 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 MIR6849-201ENST00000618543 69 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC105105.5-201ENST00000622635 1294 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTP4A1Q93096 AL606537.1-201ENST00000607258 2011 ntBASIC5.69□□□□□ -1.5
PTP4A1Q93096 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
PTP4A1Q93096 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 MIR133A2-201ENST00000347538 102 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RNU1-5P-201ENST00000362684 144 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 SNORD35A-201ENST00000363389 86 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RNA5SP279-201ENST00000365513 117 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 CXADRP1-201ENST00000398098 1095 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RN7SKP281-201ENST00000410472 352 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RN7SKP205-201ENST00000410999 307 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RNU2-18P-201ENST00000411224 162 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC079922.1-201ENST00000443291 359 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 RPL31P11-202ENST00000454082 372 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 snoU13.29-201ENST00000459370 104 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC090602.1-201ENST00000469695 252 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AL355032.1-201ENST00000472981 438 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RPS4XP17-201ENST00000479057 754 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 RNU2-45P-201ENST00000516068 187 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 SEC11B-201ENST00000518383 499 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 TPRX1P1-201ENST00000557620 319 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 OR4C49P-201ENST00000563891 900 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC027796.1-201ENST00000575593 512 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC073389.3-201ENST00000609434 935 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 CXADRP3-202ENST00000617265 1100 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC015722.2-201ENST00000622210 551 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC002044.3-201ENST00000623314 541 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC116667.2-201ENST00000641075 823 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AC079753.1-201ENST00000623243 3868 ntBASIC5.68□□□□□ -1.5
PTP4A1Q93096 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTP4A1Q93096 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTP4A1Q93096 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 SMG1P5-202ENST00000529428 4219 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 SMG1P2-201ENST00000566127 4221 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 2293 ms