Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 RNA5SP355-201ENST00000365317 135 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 RNU6-729P-201ENST00000384399 107 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 MIR7-1-201ENST00000384871 110 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AL079341.1-201ENST00000404701 1207 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AL117344.1-201ENST00000407196 616 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 U3.43-201ENST00000410734 213 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AL161742.1-201ENST00000418154 584 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 MTND1P10-201ENST00000426108 832 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 MTCO1P45-201ENST00000431457 267 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.57□□□□□ -1.52
SCN1BQ07699 KRT8P51-201ENST00000438938 274 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 RPL7L1P7-201ENST00000509986 724 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 CARSP2-201ENST00000520688 277 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC103855.4-201ENST00000533158 265 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 SETP17-201ENST00000534163 817 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 RN7SL426P-201ENST00000579106 295 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 MIR4312-201ENST00000579909 76 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN1BQ07699 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC012511.1-201ENST00000608140 449 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AL135786.2-201ENST00000608422 615 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
SCN1BQ07699 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC092701.1-201ENST00000623627 1551 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 PPBPP2-201ENST00000513150 1362 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 CCNT2P1-201ENST00000423082 1315 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN1BQ07699 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AL139135.1-201ENST00000412675 209 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 OR6R1P-201ENST00000431838 940 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC092106.2-201ENST00000436597 487 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 TXNP2-201ENST00000443918 295 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 BUD31P2-201ENST00000449374 300 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 RPL26P30-201ENST00000453533 435 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 ST13P12-201ENST00000508958 1094 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AL390198.2-201ENST00000510553 222 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN1BQ07699 RBMS2P1-201ENST00000525031 1226 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AP000859.1-201ENST00000525536 307 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN1BQ07699 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN1BQ07699 AC090774.2-201ENST00000584708 322 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC023206.1-201ENST00000605824 298 ntBASIC5.56□□□□□ -1.52
SCN1BQ07699 AC020658.4-201ENST00000613987 684 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms