Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 GPN3P1-201ENST00000423883 535 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 GTF3AP6-201ENST00000432585 986 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 GAPDHP75-201ENST00000433910 943 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC007383.1-201ENST00000445875 636 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 UBBP5-201ENST00000446970 266 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 RBMY2HP-201ENST00000457961 720 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC018635.1-201ENST00000468292 1030 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 MIR3157-201ENST00000578688 85 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 DNAJC19P3-201ENST00000594491 331 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC242628.1-201ENST00000606810 391 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC025171.4-201ENST00000607250 1047 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL590410.1-201ENST00000617925 333 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AP006248.3-201ENST00000623580 594 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 AL035425.4-201ENST00000624509 1063 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 AC119674.1-220ENST00000641502 1048 ntBASIC6.34□□□□□ -1.39
VPS50Q96JG6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
VPS50Q96JG6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
VPS50Q96JG6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.34□□□□□ -1.4
VPS50Q96JG6 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
VPS50Q96JG6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
VPS50Q96JG6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
VPS50Q96JG6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 MTND4LP14-201ENST00000429447 288 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL355355.1-201ENST00000442900 793 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL121578.2-201ENST00000448797 447 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 MTND2P30-201ENST00000456663 382 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 MTND6P32-201ENST00000457611 483 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC005017.1-201ENST00000482002 490 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC015524.1-201ENST00000491585 472 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 RNU6-415P-201ENST00000516252 97 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 RN7SL230P-201ENST00000580835 303 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AL078623.1-201ENST00000602702 907 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC091133.5-201ENST00000603088 301 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 RPAP2P1-201ENST00000603626 1168 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms