Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC023510.2-201ENST00000622162 746 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 AC090506.2-201ENST00000624521 419 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC232271.1-201ENST00000602455 2715 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC025470.1-201ENST00000510053 2032 ntBASIC5.57□□□□□ -1.52
SEC61A1P61619 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SEC61A1P61619 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A1P61619 AC007998.4-201ENST00000612496 2533 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A1P61619 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 U3.52-201ENST00000384034 216 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 RN7SKP161-201ENST00000411110 305 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 RPL7AP51-201ENST00000422016 760 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 Z68868.1-201ENST00000429048 544 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 SUMO2P8-201ENST00000434672 286 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC128677.1-201ENST00000436016 442 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 GAPDHP37-201ENST00000442317 968 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 RPS18P1-201ENST00000447840 458 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AL445991.1-201ENST00000450381 475 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AL356390.1-201ENST00000455684 397 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 RBMY2HP-201ENST00000457961 720 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC090589.1-201ENST00000473109 362 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 SNRPCP3-201ENST00000474888 476 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC093664.1-201ENST00000511779 289 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AP001000.1-201ENST00000526843 742 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 ANP32BP1-202ENST00000568553 737 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 NPM1P45-201ENST00000583151 559 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 MIR4760-201ENST00000585040 80 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A1P61619 BNIP3P40-201ENST00000596017 556 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AP001267.4-201ENST00000602598 545 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC091133.5-201ENST00000603088 301 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 AC012175.1-201ENST00000603755 531 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC024589.2-201ENST00000605642 1294 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC011815.2-201ENST00000618230 2021 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A1P61619 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A1P61619 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 AC217777.1-201ENST00000570034 1471 ntBASIC5.56□□□□□ -1.52
SEC61A1P61619 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A1P61619 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A1P61619 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SEC61A1P61619 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A1P61619 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SEC61A1P61619 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A1P61619 PSMC1P6-201ENST00000477233 1319 ntBASIC5.55□□□□□ -1.52
SEC61A1P61619 PSMC1P4-201ENST00000515236 1327 ntBASIC5.55□□□□□ -1.52
SEC61A1P61619 AL592494.2-201ENST00000425455 1548 ntBASIC5.55□□□□□ -1.52
SEC61A1P61619 AC004656.1-201ENST00000568479 4951 ntBASIC5.55□□□□□ -1.52
SEC61A1P61619 AL049634.1-201ENST00000453770 1720 ntBASIC5.55□□□□□ -1.52
SEC61A1P61619 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A1P61619 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms