Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC010266.2-201ENST00000564741 3255 ntBASIC4.47□□□□□ -1.69
FOXA3P55318 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXA3P55318 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
FOXA3P55318 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXA3P55318 AC002525.1-201ENST00000624392 1622 ntBASIC4.46□□□□□ -1.69
FOXA3P55318 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXA3P55318 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXA3P55318 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
FOXA3P55318 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
FOXA3P55318 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXA3P55318 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXA3P55318 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXA3P55318 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
FOXA3P55318 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXA3P55318 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXA3P55318 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC096632.2-201ENST00000438139 1239 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 GTF2IP14-201ENST00000441415 586 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 AL139135.2-201ENST00000445040 433 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 RPL12P39-201ENST00000455456 496 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 ACA64.4-201ENST00000459070 127 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 RPL10P7-201ENST00000495649 625 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC093816.1-201ENST00000515076 913 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 RN7SKP288-201ENST00000516227 268 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXA3P55318 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AP004609.2-201ENST00000532177 190 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 NF1P12-201ENST00000549593 583 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXA3P55318 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXA3P55318 AC005514.1-201ENST00000623521 208 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXA3P55318 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
FOXA3P55318 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 AC079248.1-201ENST00000427568 1546 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
FOXA3P55318 TUBBP10-201ENST00000427668 1301 ntBASIC4.46□□□□□ -1.7
FOXA3P55318 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXA3P55318 AC112198.2-201ENST00000426589 6996 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXA3P55318 AC100810.3-201ENST00000633189 2240 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXA3P55318 AC007842.1-201ENST00000597336 2039 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXA3P55318 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXA3P55318 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 RNA5SP375-201ENST00000362975 119 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 RNU2-5P-201ENST00000410533 180 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXA3P55318 RPS7P14-201ENST00000426405 583 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 CHCHD4P5-201ENST00000436684 427 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXA3P55318 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXA3P55318 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXA3P55318 RPL6P24-201ENST00000445338 864 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 AC092421.1-201ENST00000448148 418 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXA3P55318 ABCC13-202ENST00000463099 3842 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 RPL12P31-201ENST00000478433 450 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXA3P55318 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXA3P55318 AC018645.1-201ENST00000505003 109 ntBASIC4.45□□□□□ -1.7
FOXA3P55318 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXA3P55318 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXA3P55318 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXA3P55318 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms