Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH3P20585 AC036111.2-201ENST00000533247 901 ntBASIC6.13□□□□□ -1.43
MSH3P20585 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH3P20585 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH3P20585 AC084033.1-201ENST00000550830 633 ntBASIC6.13□□□□□ -1.43
MSH3P20585 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH3P20585 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 AC007494.1-201ENST00000562293 760 ntBASIC6.13□□□□□ -1.43
MSH3P20585 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
MSH3P20585 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH3P20585 AL591167.1-201ENST00000607321 456 ntBASIC6.13□□□□□ -1.43
MSH3P20585 AC092681.3-201ENST00000609463 678 ntBASIC6.13□□□□□ -1.43
MSH3P20585 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 AC003992.1-201ENST00000635364 557 ntBASIC6.13□□□□□ -1.43
MSH3P20585 AC111152.1-202ENST00000635848 339 ntBASIC6.13□□□□□ -1.43
MSH3P20585 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH3P20585 AL596275.2-207ENST00000641188 675 ntBASIC6.13□□□□□ -1.43
MSH3P20585 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
MSH3P20585 CCNT2P1-201ENST00000423082 1315 ntBASIC6.13□□□□□ -1.43
MSH3P20585 EIF3EP1-201ENST00000433978 1316 ntBASIC6.13□□□□□ -1.43
MSH3P20585 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 AL731532.1-201ENST00000623972 4236 ntBASIC6.13□□□□□ -1.43
MSH3P20585 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH3P20585 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH3P20585 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH3P20585 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH3P20585 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MSH3P20585 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH3P20585 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MSH3P20585 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MSH3P20585 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 MIR1275-201ENST00000408770 80 ntBASIC6.12□□□□□ -1.43
MSH3P20585 RNA5SP156-201ENST00000410250 110 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.12□□□□□ -1.43
MSH3P20585 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH3P20585 MTCO3P17-201ENST00000443775 513 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AL359091.1-201ENST00000449048 1734 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 HDAC1P2-201ENST00000453661 1398 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.12□□□□□ -1.43
MSH3P20585 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH3P20585 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 AC018797.1-201ENST00000510791 255 ntBASIC6.12□□□□□ -1.43
MSH3P20585 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH3P20585 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH3P20585 AC096921.2-201ENST00000561507 1916 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC002519.2-203ENST00000567043 837 ntBASIC6.12□□□□□ -1.43
MSH3P20585 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 MRPS21P8-201ENST00000569196 235 ntBASIC6.12□□□□□ -1.43
MSH3P20585 MIR4502-201ENST00000580432 81 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC027575.3-201ENST00000583058 2747 ntBASIC6.12□□□□□ -1.43
MSH3P20585 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.12□□□□□ -1.43
MSH3P20585 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 AL352984.2-202ENST00000613699 155 ntBASIC6.12□□□□□ -1.43
MSH3P20585 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AL683826.1-201ENST00000624104 627 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AP001052.1-201ENST00000626421 99 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC073488.6-201ENST00000632293 754 ntBASIC6.12□□□□□ -1.43
MSH3P20585 OR7A1P-202ENST00000641542 1158 ntBASIC6.12□□□□□ -1.43
MSH3P20585 AC020656.2-201ENST00000613291 5309 ntBASIC6.12□□□□□ -1.43
MSH3P20585 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MSH3P20585 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH3P20585 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH3P20585 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MSH3P20585 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH3P20585 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MSH3P20585 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MSH3P20585 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MSH3P20585 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH3P20585 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH3P20585 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH3P20585 RNU1-59P-201ENST00000364829 162 ntBASIC6.11□□□□□ -1.43
MSH3P20585 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms