Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 RN7SKP171-201ENST00000364417 303 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 RN7SKP166-201ENST00000410812 305 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 KCTD9P1-201ENST00000430462 1167 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AL512593.1-201ENST00000444758 779 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 RPL34P33-201ENST00000486062 334 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC117500.1-201ENST00000497352 755 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC090958.1-201ENST00000511122 351 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AP001000.1-201ENST00000526843 742 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC244502.2-201ENST00000543361 851 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 NDUFB9P1-201ENST00000604683 510 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 MIR6806-201ENST00000622141 64 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AC089999.3-201ENST00000622440 577 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 AL122023.1-201ENST00000622847 530 ntBASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRTM1Q9HBL6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRTM1Q9HBL6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 EIF3EP1-201ENST00000433978 1316 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 SNORA64.3-201ENST00000365647 134 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 RPL12P16-201ENST00000431098 498 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AL645936.1-201ENST00000441979 518 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CUBNP2-201ENST00000443534 1139 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC092601.1-201ENST00000444526 383 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC234771.2-201ENST00000445718 597 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CTSLP6-201ENST00000458273 1002 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 TRBV5-2-201ENST00000489095 273 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 CCDC11P1-201ENST00000503137 1162 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 Vault.2-201ENST00000516519 98 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 MIR3154-201ENST00000577829 84 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC007448.1-201ENST00000582714 234 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AP001823.1-201ENST00000604056 1003 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AL591926.1-201ENST00000620542 217 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AC021422.1-201ENST00000621212 473 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.83□□□□□ -1.48
LRTM1Q9HBL6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms