Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CLRN1P58418 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC119751.3-201ENST00000399720 670 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 ATF1P1-201ENST00000406040 927 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC096537.2-201ENST00000413707 714 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 ELOBP4-201ENST00000423418 296 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC114402.2-201ENST00000432760 643 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC011742.2-201ENST00000443818 352 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC004022.1-201ENST00000447766 1066 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC112492.1-201ENST00000449607 712 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC092691.2-201ENST00000461787 803 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 RN7SL149P-201ENST00000465197 281 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 RN7SL654P-201ENST00000479178 292 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 MRPS36P3-201ENST00000519284 130 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC069240.2-201ENST00000550242 609 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 AL132640.1-201ENST00000559594 619 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC025283.1-201ENST00000572039 734 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 MIR5095-201ENST00000578844 88 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 WDR45BP1-201ENST00000583470 1029 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 MIR5682-201ENST00000584864 76 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.05□□□□□ -1.44
CLRN1P58418 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 VN1R78P-201ENST00000597393 564 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC025588.2-201ENST00000604851 466 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AL035410.2-201ENST00000604963 864 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AL139344.1-201ENST00000605228 195 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC009283.1-201ENST00000615852 645 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC015722.2-201ENST00000622210 551 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AC104985.3-201ENST00000623479 597 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 AL596244.1-201ENST00000567068 3779 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 AC083806.2-201ENST00000617795 2685 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 AL356317.1-201ENST00000396110 1436 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 ABCA11P-202ENST00000504019 2110 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 CIR1P2-201ENST00000514821 1342 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.04□□□□□ -1.44
CLRN1P58418 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 MTHFD2P5-201ENST00000320415 844 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 MIR187-201ENST00000385062 109 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 RNA5SP176-201ENST00000390956 110 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLRN1P58418 UBE2V1P11-201ENST00000411559 285 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AC024937.2-201ENST00000411669 1242 ntBASIC6.04□□□□□ -1.44
CLRN1P58418 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.04□□□□□ -1.44
CLRN1P58418 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.04□□□□□ -1.44
CLRN1P58418 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms