Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 GAPDHP14-201ENST00000450472 937 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RANP2-201ENST00000456833 229 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC079193.1-201ENST00000460497 588 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RPL19P11-201ENST00000495944 589 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RPSAP51-201ENST00000497462 645 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AP005902.2-201ENST00000518393 307 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 CARSP2-201ENST00000520688 277 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC089984.3-201ENST00000552838 363 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 FAM72A-208ENST00000607379 1139 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 HSPD1P1-201ENST00000503199 1726 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC024587.1-201ENST00000505925 2157 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 RNA5SP321-201ENST00000362722 111 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC074375.1-201ENST00000372993 192 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 SNORA70.6-201ENST00000383934 134 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 MIR27A-201ENST00000385073 78 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 SOD1P1-201ENST00000407803 440 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GPS2P1-201ENST00000411761 986 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AL672212.1-201ENST00000422246 400 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AL157884.1-201ENST00000424561 454 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC114402.2-201ENST00000432760 643 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AL136455.1-201ENST00000441083 1240 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 RPS10P18-201ENST00000442662 495 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 RPL23AP60-201ENST00000450011 454 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 RPL23AP40-201ENST00000487630 390 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 BMS1P16-201ENST00000556075 1147 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC090826.1-203ENST00000569235 490 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 MIR4312-201ENST00000579909 76 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 WDR45BP1-201ENST00000583470 1029 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC090774.2-201ENST00000584708 322 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC006363.1-201ENST00000603806 463 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC019257.2-201ENST00000605539 497 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC016252.1-201ENST00000609721 474 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 MIR6133-201ENST00000617057 108 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms