Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AP005202.1-201ENST00000489915 867 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS10P20-201ENST00000494130 463 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPL21P131-201ENST00000497298 483 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC147055.3-201ENST00000510547 851 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 GAPDHP71-201ENST00000511530 1003 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AP001646.2-201ENST00000528645 1156 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 FAM30C-201ENST00000561158 410 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ULK4P1-202ENST00000565174 503 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 VIS1.1-201ENST00000610517 203 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL049541.2-201ENST00000626377 555 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC007993.1-201ENST00000621298 2430 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 OR52B5P-204ENST00000641744 3467 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC104454.1-201ENST00000421341 1401 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP107-201ENST00000364157 290 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP62-201ENST00000384539 329 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MIR199B-201ENST00000384849 110 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP254-201ENST00000410685 310 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL445183.3-201ENST00000414168 502 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL008987.1-201ENST00000415528 237 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 OR52S1P-201ENST00000427016 937 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 CHCHD4P5-201ENST00000436684 427 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 EXTL2P1-201ENST00000446218 416 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 SNORA81.1-201ENST00000458922 177 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RN7SL456P-201ENST00000469290 295 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RN7SL775P-201ENST00000498361 336 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MTCO1P49-201ENST00000523429 802 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC084824.1-201ENST00000550917 1005 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 IGLJCOR18-201ENST00000584002 424 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MIR3159-201ENST00000584572 74 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC010463.3-201ENST00000594077 500 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC004987.4-201ENST00000603383 338 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC107304.1-201ENST00000604229 296 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC079610.2-201ENST00000604818 690 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC015849.2-201ENST00000605738 409 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL121895.2-201ENST00000619558 447 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC093909.6-201ENST00000624757 775 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms