Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC091046.2-201ENST00000620775 665 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.58□□□□□ -1.2
MRE11P49959 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
MRE11P49959 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.58□□□□□ -1.2
MRE11P49959 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
MRE11P49959 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 Z95114.1-201ENST00000624264 14574 ntBASIC7.57□□□□□ -1.2
MRE11P49959 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 AC232271.1-201ENST00000602455 2715 ntBASIC7.57□□□□□ -1.2
MRE11P49959 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 RNA5SP350-201ENST00000363298 111 ntBASIC7.57□□□□□ -1.2
MRE11P49959 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 RN7SKP206-201ENST00000410823 293 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.57□□□□□ -1.2
MRE11P49959 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 RPL3P11-201ENST00000434028 1146 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 DBIL5P2-201ENST00000443827 253 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 REG1CP-206ENST00000447469 496 ntBASIC7.57□□□□□ -1.2
MRE11P49959 TVP23BP2-201ENST00000455082 615 ntBASIC7.57□□□□□ -1.2
MRE11P49959 RBMY2HP-201ENST00000457961 720 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 AC079594.1-201ENST00000489757 331 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC008040.4-201ENST00000494834 768 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 RN7SL775P-201ENST00000498361 336 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 MTND5P21-201ENST00000531961 522 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 MT1CP-201ENST00000567054 174 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
MRE11P49959 CTSLP2-201ENST00000580501 394 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.57□□□□□ -1.2
MRE11P49959 AC109309.2-201ENST00000612597 332 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AP000770.2-201ENST00000623694 100 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AC008993.2-201ENST00000631744 806 ntBASIC7.57□□□□□ -1.2
MRE11P49959 AL121936.2-201ENST00000641935 662 ntBASIC7.57□□□□□ -1.2
MRE11P49959 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 AC083837.1-201ENST00000565297 2994 ntBASIC7.57□□□□□ -1.2
MRE11P49959 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 MTND4P21-201ENST00000453886 1357 ntBASIC7.57□□□□□ -1.2
MRE11P49959 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MRE11P49959 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.57□□□□□ -1.2
MRE11P49959 NLRP3P1-201ENST00000622303 1785 ntBASIC7.56□□□□□ -1.2
MRE11P49959 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.56□□□□□ -1.2
MRE11P49959 MTND4P9-201ENST00000507819 1346 ntBASIC7.56□□□□□ -1.2
MRE11P49959 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MRE11P49959 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MRE11P49959 AC123769.1-201ENST00000530992 3192 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AL049634.1-201ENST00000453770 1720 ntBASIC7.56□□□□□ -1.2
MRE11P49959 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.56□□□□□ -1.2
MRE11P49959 FTOP1-201ENST00000419363 861 ntBASIC7.56□□□□□ -1.2
MRE11P49959 OR7E117P-201ENST00000422682 1112 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC114402.2-201ENST00000432760 643 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.56□□□□□ -1.2
MRE11P49959 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 AP000805.1-201ENST00000471604 784 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AL133372.1-201ENST00000493565 745 ntBASIC7.56□□□□□ -1.2
MRE11P49959 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.56□□□□□ -1.2
MRE11P49959 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.56□□□□□ -1.2
MRE11P49959 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 SCARNA1-201ENST00000517138 166 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC026407.1-201ENST00000518369 204 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.56□□□□□ -1.2
MRE11P49959 AC084851.2-201ENST00000530377 364 ntBASIC7.56□□□□□ -1.2
MRE11P49959 OR4A40P-201ENST00000533878 948 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC079866.1-201ENST00000534985 1220 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 NDUFA3P4-201ENST00000560814 250 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.56□□□□□ -1.2
MRE11P49959 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.56□□□□□ -1.2
MRE11P49959 MIR4470-201ENST00000583453 72 ntBASIC7.56□□□□□ -1.2
MRE11P49959 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms