Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.98□□□□□ -1.93
Usp4P35123 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.98□□□□□ -1.93
Usp4P35123 Gm25589-201ENSMUST00000082502 166 ntBASIC2.98□□□□□ -1.93
Usp4P35123 Gm22154-201ENSMUST00000083844 131 ntBASIC2.98□□□□□ -1.93
Usp4P35123 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.98□□□□□ -1.93
Usp4P35123 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp4P35123 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp4P35123 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Usp4P35123 Gm12143-201ENSMUST00000119666 332 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm22281-201ENSMUST00000157198 103 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm27582-201ENSMUST00000184084 126 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.97□□□□□ -1.93
Usp4P35123 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Usp4P35123 Gm44182-201ENSMUST00000204052 115 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm44922-201ENSMUST00000206690 90 ntBASIC2.97□□□□□ -1.93
Usp4P35123 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.97□□□□□ -1.93
Usp4P35123 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.97□□□□□ -1.93
Usp4P35123 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Usp4P35123 Gm25204-201ENSMUST00000082843 106 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm23847-201ENSMUST00000083829 110 ntBASIC2.97□□□□□ -1.93
Usp4P35123 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Usp4P35123 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Usp4P35123 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp4P35123 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Usp4P35123 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp4P35123 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Usp4P35123 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.96□□□□□ -1.94
Usp4P35123 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Usp4P35123 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.96□□□□□ -1.94
Usp4P35123 Gm24068-201ENSMUST00000104513 132 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm22193-201ENSMUST00000116868 76 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm26405-201ENSMUST00000158495 100 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm26022-201ENSMUST00000158663 108 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Snord93-201ENSMUST00000175580 71 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm24167-201ENSMUST00000177733 124 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm24028-201ENSMUST00000178991 124 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.96□□□□□ -1.94
Usp4P35123 Gm34139-201ENSMUST00000196166 294 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm24350-202ENSMUST00000198309 132 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm43901-201ENSMUST00000203247 453 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.96□□□□□ -1.94
Usp4P35123 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Usp4P35123 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Usp4P35123 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Usp4P35123 Gm11285-201ENSMUST00000118443 322 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm25920-201ENSMUST00000158307 99 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm26406-201ENSMUST00000158503 124 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm17161-201ENSMUST00000169187 524 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm22699-201ENSMUST00000175376 105 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Usp4P35123 Gm5224-201ENSMUST00000183060 350 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm27532-201ENSMUST00000183726 113 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Mir21b-201ENSMUST00000184317 108 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm25812-201ENSMUST00000082751 103 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Gm25895-201ENSMUST00000083714 100 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Usp4P35123 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.95□□□□□ -1.94
Usp4P35123 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Usp4P35123 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Usp4P35123 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Usp4P35123 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usp4P35123 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm24126-201ENSMUST00000104111 106 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm13801-201ENSMUST00000120750 160 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm11471-201ENSMUST00000121824 198 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm22322-201ENSMUST00000157151 111 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm23588-201ENSMUST00000157659 99 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Snord53-201ENSMUST00000175146 78 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm42623-201ENSMUST00000197225 379 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm26493-201ENSMUST00000083155 136 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Gm26265-201ENSMUST00000083277 135 ntBASIC2.94□□□□□ -1.94
Usp4P35123 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Usp4P35123 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Usp4P35123 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp4P35123 Mir1195-201ENSMUST00000116818 98 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm25321-201ENSMUST00000122558 102 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm23101-201ENSMUST00000157550 137 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm22330-201ENSMUST00000158068 115 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usp4P35123 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp4P35123 Gm26097-201ENSMUST00000179642 93 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Mir6386-201ENSMUST00000183558 104 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm29553-201ENSMUST00000189692 279 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.93□□□□□ -1.94
Usp4P35123 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Gm4945-201ENSMUST00000075152 453 ntBASIC2.93□□□□□ -1.94
Usp4P35123 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp4P35123 Gm26135-201ENSMUST00000101993 72 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Gm15272-201ENSMUST00000120865 233 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Gm7209-201ENSMUST00000122339 333 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Gm22416-201ENSMUST00000158590 88 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Gm25119-201ENSMUST00000158815 88 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Snord50b-201ENSMUST00000178497 72 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Gm43676-201ENSMUST00000197532 540 ntBASIC2.92□□□□□ -1.94
Usp4P35123 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms