Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afb2S4R1M3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17■□□□□ 0.31
H2afb2S4R1M3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17■□□□□ 0.31
H2afb2S4R1M3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17■□□□□ 0.31
H2afb2S4R1M3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17■□□□□ 0.31
H2afb2S4R1M3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17■□□□□ 0.31
H2afb2S4R1M3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17■□□□□ 0.31
H2afb2S4R1M3 Odf3b-204ENSMUST00000227834 930 ntBASIC17■□□□□ 0.31
H2afb2S4R1M3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb2S4R1M3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afb2S4R1M3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
H2afb2S4R1M3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Gm3375-201ENSMUST00000203929 796 ntBASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb2S4R1M3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms