Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb1S4R1E0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.43■□□□□ 0.06
H2afb1S4R1E0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gm12896-201ENSMUST00000118430 226 ntBASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb1S4R1E0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
H2afb1S4R1E0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb1S4R1E0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
H2afb1S4R1E0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb1S4R1E0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms