Protein–RNA interactions for Protein: Q9Z0E2

Chrd, Chordin, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrdQ9Z0E2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChrdQ9Z0E2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Gm37722-201ENSMUST00000193757 208 ntBASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChrdQ9Z0E2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ChrdQ9Z0E2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Gm27742-201ENSMUST00000184667 60 ntBASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
ChrdQ9Z0E2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ChrdQ9Z0E2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Mir770-201ENSMUST00000103252 94 ntBASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ChrdQ9Z0E2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ChrdQ9Z0E2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms