Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Gm5417-201ENSMUST00000079706 384 ntBASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Gm15565-201ENSMUST00000118890 427 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Timm23-208ENSMUST00000226683 750 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn3Q9ES97 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Gm21814-202ENSMUST00000203277 873 ntBASIC18.1■□□□□ 0.49
Rtn3Q9ES97 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Odf3b-204ENSMUST00000227834 930 ntBASIC18.1■□□□□ 0.49
Rtn3Q9ES97 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn3Q9ES97 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn3Q9ES97 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rtn3Q9ES97 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rtn3Q9ES97 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rtn3Q9ES97 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rtn3Q9ES97 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.08■□□□□ 0.48
Rtn3Q9ES97 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn3Q9ES97 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms