Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3404Q9D506 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Gm13559-201ENSMUST00000120476 863 ntBASIC18.07■□□□□ 0.48
Gm3404Q9D506 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm3404Q9D506 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.06■□□□□ 0.48
Gm3404Q9D506 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3404Q9D506 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.05■□□□□ 0.48
Gm3404Q9D506 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3404Q9D506 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.04■□□□□ 0.48
Gm3404Q9D506 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3404Q9D506 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Gm7889-201ENSMUST00000185591 958 ntBASIC18.04■□□□□ 0.48
Gm3404Q9D506 Il3ra-202ENSMUST00000223589 738 ntBASIC18.04■□□□□ 0.48
Gm3404Q9D506 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.04■□□□□ 0.48
Gm3404Q9D506 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3404Q9D506 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms