Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stag1Q9D3E6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag1Q9D3E6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Gm13186-201ENSMUST00000118031 316 ntBASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Gm11336-201ENSMUST00000118168 334 ntBASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag1Q9D3E6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Olfr129-201ENSMUST00000122318 993 ntBASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stag1Q9D3E6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Stag1Q9D3E6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stag1Q9D3E6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stag1Q9D3E6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms