Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc80Q9D0F1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc80Q9D0F1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc80Q9D0F1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc80Q9D0F1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.27■□□□□ 0.35
Ndc80Q9D0F1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Gm715-201ENSMUST00000117865 831 ntBASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc80Q9D0F1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc80Q9D0F1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc80Q9D0F1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ndc80Q9D0F1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc80Q9D0F1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc80Q9D0F1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms