Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd1Q9D0E3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd1Q9D0E3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Mir1895-201ENSMUST00000122615 79 ntBASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Lysmd1Q9D0E3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd1Q9D0E3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm5866-201ENSMUST00000177881 973 ntBASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm27494-201ENSMUST00000184735 189 ntBASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd1Q9D0E3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd1Q9D0E3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd1Q9D0E3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms