Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx47Q9CWX9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx47Q9CWX9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Ddx47Q9CWX9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx47Q9CWX9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx47Q9CWX9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx47Q9CWX9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx47Q9CWX9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx47Q9CWX9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx47Q9CWX9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx47Q9CWX9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx47Q9CWX9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms