Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Gm12350-201ENSMUST00000121208 462 ntBASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldnd1Q9CQX5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.39■□□□□ 0.38
Cldnd1Q9CQX5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.39■□□□□ 0.38
Cldnd1Q9CQX5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.38
Cldnd1Q9CQX5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Gm15165-201ENSMUST00000118140 502 ntBASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldnd1Q9CQX5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Gm29707-201ENSMUST00000196325 491 ntBASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldnd1Q9CQX5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Gm5264-201ENSMUST00000190584 848 ntBASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldnd1Q9CQX5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Gm44450-201ENSMUST00000199528 114 ntBASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Gm18421-201ENSMUST00000204122 625 ntBASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldnd1Q9CQX5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms