Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Gm44443-201ENSMUST00000204396 5633 ntBASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Gm17807-201ENSMUST00000186869 298 ntBASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Gm29518-201ENSMUST00000190858 372 ntBASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Gm43545-201ENSMUST00000196765 2779 ntBASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.12□□□□□ -0.95
Sec61bQ9CQS8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm37374-201ENSMUST00000194954 1829 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm11950-201ENSMUST00000121615 838 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm6623-201ENSMUST00000173570 544 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Ank2-226ENSMUST00000189368 339 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm17808-201ENSMUST00000200859 894 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Thoc7-209ENSMUST00000225325 765 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Sec61bQ9CQS8 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Gm5784-201ENSMUST00000179344 2478 ntBASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61bQ9CQS8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms