Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb1Q9CQ70 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Gm17661-201ENSMUST00000170317 270 ntBASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb1Q9CQ70 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Gm13216-201ENSMUST00000117145 591 ntBASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb1Q9CQ70 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
H2afb1Q9CQ70 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
H2afb1Q9CQ70 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.89□□□□□ -0.19
H2afb1Q9CQ70 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
H2afb1Q9CQ70 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms