Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim8Q99PJ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim8Q99PJ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim8Q99PJ2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim8Q99PJ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim8Q99PJ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim8Q99PJ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim8Q99PJ2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim8Q99PJ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim8Q99PJ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms